PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019211.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 298aa    MW: 33625.4 Da    PI: 5.0538
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019211.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.29e-42191443127
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                  +GfrFhPt eelv++yLk k ++k++++ e i+evd+++++P dL   + + ++ ewyfF ++d ky+++kr+nr+t  gyWk tgk++ ++++ +++
  Pbr019211.1  19 VGFRFHPTGEELVDHYLKLKKQDKDFKA-ENIPEVDVCNFDPGDLAaLTPSDNDMEWYFFGRKDYKYKNSKRSNRTTPGGYWKITGKERVIKARrSKA 115
                  7***************************.78**************8334445667************************************9985666 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyr 127
                  ++g k+tL+fy+  +pk++kt+Wvmhe  
  Pbr019211.1 116 VIGKKRTLTFYRRCEPKPKKTNWVMHEHY 144
                  79*************************75 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100546.92717167IPR003441NAC domain
SuperFamilySSF1019419.02E-4919167IPR003441NAC domain
PfamPF023657.1E-2319143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
METLGSKRKT RGGGGSGQVG FRFHPTGEEL VDHYLKLKKQ DKDFKAENIP EVDVCNFDPG  60
DLAALTPSDN DMEWYFFGRK DYKYKNSKRS NRTTPGGYWK ITGKERVIKA RRSKAVIGKK  120
RTLTFYRRCE PKPKKTNWVM HEHYLIDSEA NPKLPQKDFV ICRMKKKSDE EDTSIGEVEL  180
GSCSVSNVED HAAAVVTPGD NSSSTPLSPG YIELEDVLQA NGINDDCNAI QSPFGDNNYS  240
YTNKNDISTC DEGEPHSFTV SDFESEAPRN ISQEVCPPPE EDLEFFFYLP QLEDYTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-312016720165NO APICAL MERISTEM PROTEIN
1ut4_B6e-312016720165NO APICAL MERISTEM PROTEIN
1ut7_A6e-312016720165NO APICAL MERISTEM PROTEIN
1ut7_B6e-312016720165NO APICAL MERISTEM PROTEIN
4dul_A6e-312016720165NAC domain-containing protein 19
4dul_B6e-312016720165NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376046.10.0PREDICTED: NAC domain-containing protein 78-like isoform X2
TrEMBLM5XFX42e-70M5XFX4_PRUPE; Uncharacterized protein
STRINGVIT_15s0048g02270.t017e-45(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14450518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.22e-42NAC 014